docs work

3 files changed, 23 insertions, 19 deletions

diff --git a/manual/Doxyfile b/manual/Doxyfile
index 3813738..5103bc8 100644
--- a/manual/Doxyfile
+++ b/manual/Doxyfile
@@ -135,7 +135,7 @@ BRIEF_MEMBER_DESC      = YES
 # brief descriptions will be completely suppressed.
 # The default value is: YES.
 
-REPEAT_BRIEF           = YES
+REPEAT_BRIEF           = NO
 
 # This tag implements a quasi-intelligent brief description abbreviator that is
 # used to form the text in various listings. Each string in this list, if found
@@ -566,7 +566,7 @@ EXTRACT_STATIC         = NO
 # for Java sources.
 # The default value is: YES.
 
-EXTRACT_LOCAL_CLASSES  = YES
+EXTRACT_LOCAL_CLASSES  = NO
 
 # This flag is only useful for Objective-C code. If set to YES, local methods,
 # which are defined in the implementation section but not in the interface are
@@ -607,7 +607,7 @@ HIDE_UNDOC_MEMBERS     = NO
 # if EXTRACT_ALL is enabled.
 # The default value is: NO.
 
-HIDE_UNDOC_CLASSES     = NO
+HIDE_UNDOC_CLASSES     = YES
 
 # If the HIDE_UNDOC_NAMESPACES tag is set to YES, Doxygen will hide all
 # undocumented namespaces that are normally visible in the namespace hierarchy.
@@ -629,7 +629,7 @@ HIDE_FRIEND_COMPOUNDS  = NO
 # blocks will be appended to the function's detailed documentation block.
 # The default value is: NO.
 
-HIDE_IN_BODY_DOCS      = NO
+HIDE_IN_BODY_DOCS      = YES
 
 # The INTERNAL_DOCS tag determines if documentation that is typed after a
 # \internal command is included. If the tag is set to NO then the documentation
@@ -673,13 +673,13 @@ HIDE_COMPOUND_REFERENCE= NO
 # will show which file needs to be included to use the class.
 # The default value is: YES.
 
-SHOW_HEADERFILE        = YES
+SHOW_HEADERFILE        = NO
 
 # If the SHOW_INCLUDE_FILES tag is set to YES then Doxygen will put a list of
 # the files that are included by a file in the documentation of that file.
 # The default value is: YES.
 
-SHOW_INCLUDE_FILES     = YES
+SHOW_INCLUDE_FILES     = NO
 
 # If the SHOW_GROUPED_MEMB_INC tag is set to YES then Doxygen will add for each
 # grouped member an include statement to the documentation, telling the reader
@@ -705,7 +705,7 @@ INLINE_INFO            = YES
 # name. If set to NO, the members will appear in declaration order.
 # The default value is: YES.
 
-SORT_MEMBER_DOCS       = YES
+SORT_MEMBER_DOCS       = NO
 
 # If the SORT_BRIEF_DOCS tag is set to YES then Doxygen will sort the brief
 # descriptions of file, namespace and class members alphabetically by member
@@ -758,19 +758,19 @@ STRICT_PROTO_MATCHING  = NO
 # list. This list is created by putting \todo commands in the documentation.
 # The default value is: YES.
 
-GENERATE_TODOLIST      = YES
+GENERATE_TODOLIST      = NO
 
 # The GENERATE_TESTLIST tag can be used to enable (YES) or disable (NO) the test
 # list. This list is created by putting \test commands in the documentation.
 # The default value is: YES.
 
-GENERATE_TESTLIST      = YES
+GENERATE_TESTLIST      = NO
 
 # The GENERATE_BUGLIST tag can be used to enable (YES) or disable (NO) the bug
 # list. This list is created by putting \bug commands in the documentation.
 # The default value is: YES.
 
-GENERATE_BUGLIST       = YES
+GENERATE_BUGLIST       = NO
 
 # The GENERATE_DEPRECATEDLIST tag can be used to enable (YES) or disable (NO)
 # the deprecated list. This list is created by putting \deprecated commands in
@@ -801,21 +801,21 @@ MAX_INITIALIZER_LINES  = 30
 # list will mention the files that were used to generate the documentation.
 # The default value is: YES.
 
-SHOW_USED_FILES        = YES
+SHOW_USED_FILES        = NO
 
 # Set the SHOW_FILES tag to NO to disable the generation of the Files page. This
 # will remove the Files entry from the Quick Index and from the Folder Tree View
 # (if specified).
 # The default value is: YES.
 
-SHOW_FILES             = YES
+SHOW_FILES             = NO
 
 # Set the SHOW_NAMESPACES tag to NO to disable the generation of the Namespaces
 # page. This will remove the Namespaces entry from the Quick Index and from the
 # Folder Tree View (if specified).
 # The default value is: YES.
 
-SHOW_NAMESPACES        = YES
+SHOW_NAMESPACES        = NO
 
 # The FILE_VERSION_FILTER tag can be used to specify a program or script that
 # Doxygen should invoke to get the current version for each file (typically from
@@ -991,7 +991,7 @@ WARN_LOGFILE           =
 # spaces. See also FILE_PATTERNS and EXTENSION_MAPPING
 # Note: If this tag is empty the current directory is searched.
 
-INPUT                  = "..\manual"
+INPUT                  = ../manual ../include
 
 # This tag can be used to specify the character encoding of the source files
 # that Doxygen parses. Internally Doxygen uses the UTF-8 encoding. Doxygen uses
@@ -1031,11 +1031,9 @@ INPUT_FILE_ENCODING    =
 # provided as Doxygen C comment), *.py, *.pyw, *.f90, *.f95, *.f03, *.f08,
 # *.f18, *.f, *.for, *.vhd, *.vhdl, *.ucf, *.qsf and *.ice.
 
-FILE_PATTERNS          = *.c \
-                         *.cc \
+FILE_PATTERNS          = *.cc \
                          *.cxx \
                          *.cxxm \
-                         *.cpp \
                          *.cppm \
                          *.ccm \
                          *.c++ \
@@ -1086,7 +1084,7 @@ FILE_PATTERNS          = *.c \
 # be searched for input files as well.
 # The default value is: NO.
 
-RECURSIVE              = NO
+RECURSIVE              = YES
 
 # The EXCLUDE tag can be used to specify files and/or directories that should be
 # excluded from the INPUT source files. This way you can easily exclude a
@@ -1311,7 +1309,7 @@ USE_HTAGS              = NO
 # See also: Section \class.
 # The default value is: YES.
 
-VERBATIM_HEADERS       = YES
+VERBATIM_HEADERS       = NO
 
 # If the CLANG_ASSISTED_PARSING tag is set to YES then Doxygen will use the
 # clang parser (see:
diff --git a/manual/OpenBooks_Manual.pdf b/manual/OpenBooks_Manual.pdf
index 9c5c6a1..8b92215 100644
--- a/manual/OpenBooks_Manual.pdf
+++ b/manual/OpenBooks_Manual.pdf
diff --git a/manual/new_header.tex b/manual/new_header.tex
index 0c34f4c..758020f 100644
--- a/manual/new_header.tex
+++ b/manual/new_header.tex
@@ -177,6 +177,12 @@
     \markright{\thesection\ #1}%
   }
 
+  % Used for parameters within a detailed function description
+  \renewcommand{\DoxyParamCaption}{%
+    \renewcommand{\item}[3][]{\hspace*{0.0cm} ##1 {\em ##2}##3}% 
+  }{%
+  }
+
   % ToC, LoF, LoT, bibliography, and index
   % Indices & bibliography
   \usepackage[numbers]{natbib}